Shengyuan Wang, PhD
School of Systems Biology
George Mason University
Manassas, VA 20110

Coursera: Genomic Data Science Specialization from John Hopkins University

• Python for Genomic Data Science
  • Project: FASTA Files
  
  
• Algorithms for DNA Sequencing
  • Project1: Naive Exact
  • Project2: Boyer Moore
  • Project3: Dynamic Programming
  • Project4: Assemble
  
  
• Command Line Tools for Genomic Data Science
  • Quiz1: Basic Bash-shell
  • Quiz2: Samtools and Bedtools
  • Quiz3: Bowtie2
  • Quiz4: Tophat amd Cufflinks
  
  
• Bioconductor for Genomic Data Science
  • Quiz1: GRanges, AnnotationHub and Roadmap Epigenomics
  • Quiz2: Biostrings and BSgenome
  • Quiz3: ExpressionSet, GEOquery and biomaRt
  • Quiz4: Rsamtools, oligo, limma, minfi, edgeR and DESeq2
  
  
• Statistics for Genomic Data Science
  • Quiz1: Exploratory Analysis and Clustering
  • Quiz2: Pre-processing, Linear Regresssion and Batch Effects
  • Quiz3: Logistic Regression and Multiple Testing
  • Quiz4: Gene Set Analysis
  
  
• Genomic Data Science Capstone
  • Project: Exploratory Analysis and Clustering