xrama

Main Table of Contents

VERSION 3.1
Thu 28 Feb 2002


Description

xrama shows a Ramachandran movie, that is, it shows the Phi/Psi angles as a function of time in an X-Window.

Static Phi/Psi plots for printing can be made with g_rama.

Some of the more common X command line options can be used:
-bg, -fg change colors, -font fontname, changes the font.

Files

optionfilenametypedescription
-f traj.xtc Input Generic trajectory: xtc trr trj gro g96 pdb
-s topol.tpr Input Generic run input: tpr tpb tpa

Other options

optiontypedefaultdescription
-[no]h bool no Print help info and quit
-[no]X bool no Use dialog box GUI to edit command line options
-nice int 0 Set the nicelevel
-b time -1 First frame (ps) to read from trajectory
-e time -1 Last frame (ps) to read from trajectory
-dt time -1 Only use frame when t MOD dt = first time (ps)


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