QuickPhyre Alignment of query sequence to fold library protein c2ekcA_

FASTA version of alignment

PSSM Score Key
-10                      10
                             
Bad                      Good
Secondary Structure Key
Ebeta strand
CCoil
Halpha helix

Query Index....:....10....:....20....:....30....:....40....:....50....:....60....:....70....:....80....:....90....:....100....:....110...        .:....120....:....130....:....140....:....150....:...    .160....:         ....170....:....180....:....190....:....200.. ..:....210....:....220....:....230..  ..:....240....:....250....:....260....:....270..             ..  :.. ..280   ....:....          290....:....300..      ..:....310....:....320....:....330....:.      ...340....:....350....:....360....:....370....:....380....:....390....:....400....:....410....:....420....:....430....:....440....:....450....:....460....:....470....:....480....:....490....:....500....:....510....:....520....:....530....:....540....:....550....:....560....:....570....:....580....:....590....:....600....:....610....:....620....:....630....:....640....:....650....:
Query Sequence Conservation 30 %-----------------------------------------------------------------------------------------------------------------        ---------------------------------------------    -------         ------------------------------------- ------------------------------  ----------------------------------------             --  --- ---   ---------          -------------      ----------------------------------      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 40 %-----------------------------------------------------------------------------------------------------------------        ---------------------------------------------    -------         ------------------------------------- ------------------------------  ----------------------------------------             --  --- ---   ---------          -------------      ----------------------------------      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 50 %-----------------------------------------------------------------------------------------------------------------        ---------------------------------------------    -------         ------------------------------------- ------------------------------  ----------------------------------------             --  --- ---   ---------          -------------      ----------------------------------      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 60 %-----------------------------------------------------------------------------------------------------------------        ---------------------------------------------    -------         ------------------------------------- ------------------------------  ----------------------------------------             --  --- ---   ---------          -------------      ----------------------------------      --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Entropy (Normalised)22221321212143123000000000000000014123600000000000000023221212421431000101120101112011021221221010111001010021112        112111121112252231212111211121110113212132325    4121111         0111112022113211211111101111211231132 111111011012114111431222342233  1102013111111011013211322310212110221112             32  113 112   111211111          1111011121111      0111011110101122523223111010132112      21111111111322111110211211131231222122213111732444434431124244212132111000000000000273141121132112311321310000101111145111221232013111311231132331223511321121221245421232233223222321111111311111101011123212112110231111112233733442132123322211241171332412601071124211212212310212223332232334111212511211121011121111221112
Query Sequence Evolutionary Trace?XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                 XXXXXXXXXXXX
 
Query Predicted Secondary StructureCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHH--------HHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEC----CCCCCCC---------CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEECCCC--HHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHC-------------CC--CCC-HHH---HHHHHHCCC----------CHHHHHHHHHHHH------HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHEECCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Query SequenceMVNEARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERLREKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIA--------STAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRG----DPIGDQW---------EEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHP-EAGSFEADLKHLKEKVSAGADFIITQLFFE--ADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLS-------------KL--EVP-QEI---KDVIEPIKD----------NDAAIRNYGIELA------VSLCQELLASGLVPGLHFYTLNREMATTEVLKRL------GMWTEDPRRPLPWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLELLNRPTQNARETEAP
Match Quality                                                                                                                         ++++++-----++++++-+-++++--++++++-++++ +++-+ +    ++--+-+         -+++---++-+++++-+++++++ +-+-+-++  -++ ----+++-++++++   ++++-++   +-+  ++--+++++++++++++ +++- +-+-++++-++++++++             ++  +++ +++   +++++++-+          +++++++++ +++      --+++ +++++           +++-++++++++                                                                                                                                                                                                                                                                                                                                      
Alignment Accuracy                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
c2ekcA_ Sequence-----------------------------------------------------------------------------------------------------------------MGRISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGT-DILEI-GFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD-IPFLLMTY--YNPIFRIGLEKFCRLSRE---KGIDGFI---VPDLPPEEAEELKAVMKKYVLS-FVPL-GAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHAREIG-SFADGVVVGSALVK-LAGQK-----------KIEDLGNLVKELKEGLRE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
c2ekcA_ Predicted Secondary Structure-----------------------------------------------------------------------------------------------------------------CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCC-CEEEE-CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC-CCEEHHHH--HHHHHHCCHHHHHHHHHH---CCCCEEE---ECCCCHHHHHHHHHHHHHCCCC-EEEE-ECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH-HHCCEEEEHHHHHH-HHHCC-----------CHHHHHHHHHHHHHHHCC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
c2ekcA_ Known Secondary Structure-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
Model Pockets/Cavities/Clefts                                                                                                                         1 11   111     4                       1            344          4                              3                             3 3 22   2                   22         2  2                   1  111               1                                4                                                                                                                                                                                                                                                                                                                                                                    
Consensus Function 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000        303300033300000000000000000000000000000300000    0001000         0000000000000000000000000000000100000 000000000000000000000001010110  1000000000000000000011000000000100100000             03  333 000   000000003          0000000000000      0000000000000000000000000000000000      00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Template Index                                                                                                                  ....:....10....:....20....:....30....:....40....: ....50 ....:....60....:....70....:....80....:....90.... :....100..  ..:....110....:....120   ....:..   ..130....:....140....:.... 150... .:....160....:....170....:....180....:....190....:....200....:....210....:....220....: ....230....:.... 240....           :....250....:....260..                                                                                                                                                                                                                                                                                                                               

Consensus Functional Sites Mapped onto Model
No high scoring functional sites found