QuickPhyre Alignment of query sequence to fold library protein d1xkya1

FASTA version of alignment

PSSM Score Key
-10                      10
                             
Bad                      Good
Secondary Structure Key
Ebeta strand
CCoil
Halpha helix

Query Index....:....10....:....20....:....30....:....40....:....50....:....60...           .:.  ...70....:....80....:....90....:....100....:....110....:....120  ....:....130....:....140....:....150....:....160....:....170....:....180....:....190....:..  ..200....:....210....:.       ...220....:....230....:....240....:....250....:....260....:....270....:         ....280....:.. ..290....:....300....:....310....:....320....:....330....:....340....:..                    ..350....:....360....:....370....:....380....:....390....:....400....:....410....:....420....:....430....:....440....:....450....:....460....:....470....:....480....:....490....:....500....:....510....:....520....:....530....:....540....:....550....:....560....:....570....:....580....:....590....:....600....:....610....:....620....:....630....:....640....:....650....:
Query Sequence Conservation 30 %---------------------------------------------------------------           ---  ------------------------------------------------------  -----------------------------------------------------------------------------  -------------------       -----------------------------------------------------------         ------------ ------------------------------------------------------------                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 40 %---------------------------------------------------------------           ---  ------------------------------------------------------  -----------------------------------------------------------------------------  -------------------       -----------------------------------------------------------         ------------ ------------------------------------------------------------                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 50 %---------------------------------------------------------------           ---  ------------------------------------------------------  -----------------------------------------------------------------------------  -------------------       -----------------------------------------------------------         ------------ ------------------------------------------------------------                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 60 %---------------------------------------------------------------           ---  ------------------------------------------------------  -----------------------------------------------------------------------------  -------------------       -----------------------------------------------------------         ------------ ------------------------------------------------------------                    ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Entropy (Normalised)222213221122431230000000000000000142236000000000000000232212124           214  310000011201011120110212212210112110010100211121121111  21112152231212111211120111113212132325412110101111120121132112111111021112112  3113211011101101211       41114312223422331102013111111011012211322310212110221112321         141121112111 111111011121112021101111110112253332311101013221221111111111                    322111110111211132231222122213111832444444431124244212132111000000000000273141121132012311321310000001111145120211232013111311231132332223612321121221245421233233223222321111111311111101012123112112210221111112233843443233124332211241282332412601071124211222212310212223332233334111212511212111111121111221113
Query Sequence Evolutionary Trace?XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                      XXXXXXXXXXXX
 
Query Predicted Secondary StructureCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE-----------ECC--CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC--CCCCCCCCCHHHHHHHHHH-------HHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCC---------CCHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC--------------------CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Query SequenceMVNEARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERLREKMRRRLESGDKWFSLE-----------FFP--PRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYC--GLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGDQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGY--PKGHPEAGSFEADLKHLKE-------KVSAGVDFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLE---------VPQEIKDVIEPI-KDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDPRRPL--------------------PWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLELLNRPTQNARETEAP
Match Quality                                                                          +++  +-++--++++++-+++++++-++++-+----+++++-++--- +++++++++++  +++++++  +-+-+-++--++++++++++++-++++    ++--+++++      -+++++-++--+-- ++-+-++  ++---+--++++ ++++++       + ++--+            ++++++-+++++-+--++++    +++--++-++  -+++         +++++++-++++ +++-++++++ -++-+++++-++++++           +-++-++++-+++-+++-+-++                                                                                                                                                                                                                                                                                                                                         
Alignment Accuracy                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
d1xkya1 Sequence---------------------------------------------------------------MIDFGTIATAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEK-VALYRHVVSVVDKRVPVIAG--TGSNNTHASIDLTKKATEVGVDAVMLV----APYYNKPSQ------EGMYQHFKAIAEST-PLPVMLYNVPGRSIVQISVDT-VVRLSEIENIVAIK-DAGGD------------VLTMTEIIEKTADDFAVYSG----DDGLTLPAMA--VGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKL-HQLLVRVTDSLFMAPS-----------PTPVKTALQMVGLDVGSVRLPLLPLTEEERVTLQSVMQSIPR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
d1xkya1 Predicted Secondary Structure---------------------------------------------------------------CCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHH-HHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHHHCCCCEEEEC----CCCCCCCCH------HHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCHHH-HHHHHCCCCEEEEE-CCCCC------------HHHHHHHHHHCCCCEEEEEC----CHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH-HHHHHHHHHHHHHCCC-----------HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
d1xkya1 Known Secondary Structure--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
Model Pockets/Cavities/Clefts                                                                          1                    1   111111                                  1                            1                                                                                                         2 11  11                1         11  1   1                         1                   1   1                                                                                                                                                                                                                                                                                                                                                       
Consensus Function 000000000000000000000000000000000000000000000000000000000000000           300  000000000000000030003333330000000000000000000000000000  00003000000000000000000000000000030000000000000000000000000000000000000000000  0000000000000000000       00000000000000000000000000000000001033003300000000000000003         330030003000 000000000000000000000300000000000000000003000300000000000000                    000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Template Index                                                                ....:....10....:....20....:....30....:....40....:....50....:... .60....:....70....:...  .80....:....90....:....100....:    ....110....      :....120....:... .130....:....140....:.... 150....:....160... .:...            .170....:....180....:...    .190....:...  .200....:....210....:....220....:....230.... :....240....:....250           ....:....260....:....270....:....280....:....290..                                                                                                                                                                                                                                                                                                                    

Consensus Functional Sites Mapped onto Model
No high scoring functional sites found