QuickPhyre Alignment of query sequence to fold library protein c2v8zC_

FASTA version of alignment

PSSM Score Key
-10                      10
                             
Bad                      Good
Secondary Structure Key
Ebeta strand
CCoil
Halpha helix

Query Index....:....10....:....20....:....30....:....40....:....50....:....60...                                       .:.  ...70....:....80....:....90....:....100....:....110....:....120  ....:....130....:....140....:....150....:....160....:....170....:....180....:... .190....:....200....:....210....:....220....: ....230....:....240....:....250....:....260....:....270....:         ....280....:.. ..290....:....300..  ..:.           ...310....:..      ..320....  :....330....:....340....:....350....:...  .360....:....370....:....380....:....390....:....400....:....410....:....420....:....430....:....440....:....450....:....460....:....470....:....480....:....490....:....500....:....510....:....520....:....530....:....540....:....550....:....560....:....570....:....580....:....590....:....600....:....610....:....620....:....630....:....640....:....650....:
Query Sequence Conservation 30 %---------------------------------------------------------------                                       ---  ------------------------------------------------------  -------------------------------------------------------------------- ------------------------------------- --------------------------------------------------         ------------ ---------------  ----           -----------      -------  ----------------------------------  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 40 %---------------------------------------------------------------                                       ---  ------------------------------------------------------  -------------------------------------------------------------------- ------------------------------------- --------------------------------------------------         ------------ ---------------  ----           -----------      -------  ----------------------------------  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 50 %---------------------------------------------------------------                                       ---  ------------------------------------------------------  -------------------------------------------------------------------- ------------------------------------- --------------------------------------------------         ------------ ---------------  ----           -----------      -------  ----------------------------------  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 60 %---------------------------------------------------------------                                       ---  ------------------------------------------------------  -------------------------------------------------------------------- ------------------------------------- --------------------------------------------------         ------------ ---------------  ----           -----------      -------  ----------------------------------  ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Entropy (Normalised)222213221122431230000000000000000142236000000000000000232212124                                       214  310000011201011120110212212210112110010100211121121111  21112152231212111211120111113212132325412110101111120121132112111111 0211121123113211011101101211411143122 23422331102013111111011012211322310212110221112321         141121112111 111111011121112  0211           01111110112      2533323  1110101322122111111111132211111011  1211132231222122213111832444444431124244212132111000000000000273141121132012311321310000001111145120211232013111311231132332223612321121221245421233233223222321111111311111101012123112112210221111112233843443233124332211241282332412601071124211222212310212223332233334111212511212111111121111221113
Query Sequence Evolutionary Trace?XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                              XXXXXXXXXXXX
 
Query Predicted Secondary StructureCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE---------------------------------------ECC--CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEE-EEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCC---------CCHHHHHHHHHC-CCCHHHHHHHHHHHH--HHHH-----------HHHHHCCCCCC------EEEEECC--CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Query SequenceMVNEARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERLREKMRRRLESGDKWFSLE---------------------------------------FFP--PRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYC--GLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGDQWEEEEGGFNYAVDLVKHIRSEFGD-YFDICVAGYPKGHPEAGSFEADLKHLKEKVSAGVDFI-ITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLE---------VPQEIKDVIEPI-KDNDAAIRNYGIELA--VSLC-----------QELLASGLVPG------LHFYTLN--REMATTEVLKRLGMWTEDPRRPLPWALSAHPKRR--EEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLELLNRPTQNARETEAP
Match Quality                                                                                                      +-+  +-++--++++++-+++++++-++++-+----+++++-++--- +++++++++++  ++-++++  +-+-+-++--++++++++++++ ++++   +++-++++++      -+++++-++--+- ++-+-+--++++-----++++ ++++++-+--   ++ +-----++++++++++++++++-+--++++    +-+--++-++  -+++         +++++++-++++ +++-++++++--+++  ++++           +-+--++++++      +  -++-  +-+++++++++++++-++-+++-+     +++++                                                                                                                                                                                                                                                                                                            
Alignment Accuracy                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
c2v8zC_ Sequence---------------------------------------------------------------MGSSHHHHHHSAGENLYFQGQQGDLMPQSALFTGIIPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEER-KAIARFAIDHVDRRVPVLIG--TGGTNARETIELSQHAQQAGAD-GIVV---INPYYWKVSE------ANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPAL-VKTLADSRSN---IIGIKDTIDSVAHLRSMIHTVKGAHPHFTVLCG----YDDHLFNTLL--LGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQMYQLDTPFVNVIKEAIVLCGRPVSTHVLPPA--SPLDEPRKAQLKTLLQQLKLCCGRTRAPPP-----PPLRSGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
c2v8zC_ Predicted Secondary Structure---------------------------------------------------------------CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHH-HHHHHHHHHHHCCCCEEEEE--CCCCCHHHHHHHHHHHHHCCCC-EEEE---CCCCCCCCCH------HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHH-HHHHHHHCCC---EEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEC----CHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHCHHHCCCCCCCC-----CCCCCCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
c2v8zC_ Known Secondary Structure--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
Model Pockets/Cavities/Clefts                                                                                                                                  1                                  1                                1                                                                                                1                                                                                                                                                                                                                                                                                                                                                                                                                                                      
Consensus Function 000000000000000000000000000000000000000000000000000000000000000                                       000  000000000000000000000003000000000000000000000000000000  00300000000000000000000000000000000300000000000000000000000000000000 0000000000000000000000000000000000000 00000000000000000000000003000000000000000000000000         000000000000 000000000000000  0000           00000000000      0000000  0000000000000000000000000000000000  0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Template Index                                                                ....:....10....:....20....:....30....:....40....:....50....:....60....:....70....:....80....:. ...90....:....100....:.  ...110....:....120....:... .130..   ..:....140..      ..:....150....:....160....:....170....:.. ..180....:..   ..190....:....200....:....210....:....220    ....:....230  ....:....240....:....250....:....260....:....270....:....280....:....290....:....300....:.  ...310....:....320....:....330....:.     ...340...                                                                                                                                                                                                                                                                                                         

Consensus Functional Sites Mapped onto Model
No high scoring functional sites found