QuickPhyre Alignment of query sequence to fold library protein c2ehhE_

FASTA version of alignment

PSSM Score Key
-10                      10
                             
Bad                      Good
Secondary Structure Key
Ebeta strand
CCoil
Halpha helix

Query Index....:....10....:....20....:....30....:....40....:....50....:....60...         .:....70. ...:....80....:....90....:....100....:....110....:....120  ....:....130....:....140....:....150....:....160....:....170....:....180....:... .190....:....200....:....210....:...       .220....:....230....:....240....:....250....:....260....:....270....:         ....280....:.. ..290....:....300....:....310....:....320....:....330....:....340....:..                        ..350....:....360....:....370....:....380....:....390....:....400....:....410....:....420....:....430....:....440....:....450....:....460....:....470....:....480....:....490....:....500....:....510....:....520....:....530....:....540....:....550....:....560....:....570....:....580....:....590....:....600....:....610....:....620....:....630....:....640....:....650....:
Query Sequence Conservation 30 %---------------------------------------------------------------         -------- -------------------------------------------------  -------------------------------------------------------------------- ------------------------------       ---------------------------------------------------------         ------------ ------------------------------------------------------------                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 40 %---------------------------------------------------------------         -------- -------------------------------------------------  -------------------------------------------------------------------- ------------------------------       ---------------------------------------------------------         ------------ ------------------------------------------------------------                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 50 %---------------------------------------------------------------         -------- -------------------------------------------------  -------------------------------------------------------------------- ------------------------------       ---------------------------------------------------------         ------------ ------------------------------------------------------------                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Conservation 60 %---------------------------------------------------------------         -------- -------------------------------------------------  -------------------------------------------------------------------- ------------------------------       ---------------------------------------------------------         ------------ ------------------------------------------------------------                        ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Query Sequence Entropy (Normalised)222213221122431230000000000000000142236000000000000000232212124         21431000 0011201011120110212212210112110010100211121121111  21112152231212111211120111113212132325412110101111120121132112111111 021112112311321101110110121141       114312223422331102013111111011012211322310212110221112321         141121112111 111111011121112021101111110112253332311101013221221111111111                        322111110111211132231222122213111832444444431124244212132111000000000000273141121132012311321310000001111145120211232013111311231132332223612321121221245421233233223222321111111311111101012123112112210221111112233843443233124332211241282332412601071124211222212310212223332233334111212511212111111121111221113
Query Sequence Evolutionary Trace?XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                      XXXXXXXXXXXX
 
Query Predicted Secondary StructureCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEE---------ECCCCCCC-HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC-CCEEEEECCCCCCCCCCCHHHHHHHHHHHH-------HHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCC---------CCHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCC------------------------CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHEEECCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEECCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Query SequenceMVNEARGNSSLNPCLEGSASSGSESSKDSSRCSTPGLDPERHERLREKMRRRLESGDKWFSLE---------FFPPRTAE-GAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYC--GLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGDQWEEEEGGFNYAVDLVKHIRSEFGD-YFDICVAGYPKGHPEAGSFEADLKHLKEKV-------SAGVDFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLE---------VPQEIKDVIEPI-KDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDPRRPL------------------------PWALSAHPKRREEDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLELLNRPTQNARETEAP
Match Quality                                                                        +-+-+++- -++++++-+++++++-++++-+--+-++-++-++--- +++++++++++  +++++++  +-+-+-++--++++++++++++-++++    ++--+++++      -+++++-++--+- ++-+-+--+++---+--++++ ++++++-+       ++--+            ++++++-+++++-+--++++    +-+--++-++  -+++         +++-+++-++++ +++-++++++--++ +++++-++++++           +-++-++++-+++-+++-+-++                                                                                                                                                                                                                                                                                                                                             
Alignment Accuracy                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
c2ehhE_ Sequence---------------------------------------------------------------MFQGSIVALITPFKEGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEH-EKVIEFAVKRAAGRIKVIAG--TGGNATHEAVHLTAHAKEVGADGALVV----VPYYNKPTQ------RGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDT-MFKLASECENIVASKESTPN------------MDRISEIVKRLGESFSVLSG----DDSLTLPMMA--LGAKGVISVANNVMPREVKELIRAALEGDFRRAREIHYYL-HDLFKVLFIETN-----------PIPVKTACWMLGMCEKEFRLPLTEMSPENENKLREVLKKYNLPLKN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
c2ehhE_ Predicted Secondary Structure---------------------------------------------------------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHH-HHHHHHHHHHCCCCCEEEEE--CCCCCHHHHHHHHHHHHHCCCCEEEEC----CCCCCCCCH------HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHH-HHHHHHHCCCEEEEECCCCC------------HHHHHHHHHHCCCCEEEEEC----CHHHHHHHHH--CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHHHCCC-----------HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
c2ehhE_ Known Secondary Structure--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
 
Model Pockets/Cavities/Clefts                                                                        1                   1    11111  1 1                             1                            3                                     444 3   5               4  4                 22            2    24222111555 11          1 1              1   1  2 2                     5  55                                                                                                                                                                                                                                                                                                                                                                              
Consensus Function 000000000000000000000000000000000000000000000000000000000000000         30000000 0000000000030000333330030300000000000000000000000  00003000000000000000000000000000010000000000000000000000000000000000 000000100000000000000000000000       000000000011000000000000100001011133300003300000000003030         000030003001 100000000000000000000000000000000000000000000000000000000000                        000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Template Index                                                                ....:....10....:....20....:....30....:....40....:....50....: ....60....:....70....:  ....80....:....90....:....100..    ..:....110.      ...:....120....:....130....:....140....:. ...150....:....160....:.            ...170....:....180....:.    ...190....:.  ...200....:....210....:....220....:....230....:. ...240....:...           .250....:....260....:....270....:....280....:....290....                                                                                                                                                                                                                                                                                                                    

Consensus Functional Sites Mapped onto Model
No high scoring functional sites found